July 2016:
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Left-to-right; rows from Front to Back:
Row#1: Zheng Shi (MSc), Hao Zhu (Summer Intern [MITACS]), Junfeng Wen (PhD), Neil
Borle (MSc)
Row#2: Siyang Tian (MSc), Mina Gheiratmand (PDF),
Haipeng (Paul) Li (Pgmer), Tanvir Sajed (incoming MSc)
Row#3: Roberto Vega (MSc),
Russ Greiner (Prof), Ronghao Yang (Summer Ugrad)
Row#4: Jingjiao Ni (Summer Ugrad), Abhinav Agrawalla (Summer Intern [UARE]),
Luke Kumar (MSc)
Row#5: Bret Hoehn (Sr Pgmer), Iain Smith (Summer Intern [HIP]),
Siddharth Muthukumar (Summer Intern [UARE])
Not shown:
Jay Kumar (Pgmer),
Farzaneh Mirzazadeh (PhD),
Negar Hassanpour (PhD),
Max Uhlich (Pgmer),
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(Earlier photos)
GradDB
Current Students and Post Doctoral Fellows
- Postdoctoral Fellows
- Doctoral (PhD) Students
- Negar Hassanpour
(PhD @ UofA [Sept 2015-...])
[Counterfactual Matching for Survival Prediction]
- Roberto Vega
(M.Sc. @ UofA [January 2016-...])
[fMRI analysis (w/M Brown)]
-
Junfeng Wen
(Ph.D. @ UofA [Sept 2013-...];
AI-TF Fellowship (2016-...))
[Covariate Shift]
- James Benoit
(PhD [Psychiatry] @ UofA, with A Greenshaw, [Sept 2013-...] AIHS Fellowship)
[Analyzing Psychiatric Data]
- Michal Juhas
(PhD [Psychiatry] @ UofA, with A Greenshaw, [Sept 2013-...] AIHS Fellowship)
[Analyzing Psychiatric Data]
- Masters (MSc) Students
- Undergrad
- Hao Zhu [Globalink: July 2016 - Oct 2016 (Survival Predict)]
High School Internship Program (HIP)
- Iain Smith [June -- Aug 2016 (fMRI analysis, w/M Gheiratmand)]
External for ...
- Maxwell Uhlich [Jan 2015 - ... - APCaRI (J Lewis)]
[Jan 2013 - July 2014; BTAP Imaging (w/K Punithaku, B Hoehn)]
- Haipeng (Paul) Li [Nov 2014 - ... - IDM/EASI (E Ryan);
PSSP; etc]
UofA CS Co-Authors
- Postdoctoral fellows
- Chun-Num Yu (Sept
2010 - Sept 2012)
[Survival Prediction; Covariate shift] -- now at Bell Labs
-
Mohamed Ben Salah (w/
Pierre Boulanger) [Feb - Dec 2013] -- now in US
PhD students
- Farzaneh Mirzazadeh
(PhD @ UofA [April 2012]; NSERC [w/D Schuurmans])
[Linkage analysis, ...]
- Felicity Allen
(ICT; Ph.D. @ UofA [Sept 2010 - Dec 2015])
[Interpreting ESI MassSpec; now England]
- Sheehan Khan
(NSERC, Alberta Ingenuity, Ralph Steinhauer,
PIMS ITGC
Fellowship in Mathematical Biology; Ph.D. @ UofA [Sept 2008 -- May 2015])
[Understanding Association Studies]
- Siamak (Mohsen) Ravanbakhsh
(M.Sc. @ UofA [May'08- Sept'09]) (AIFT [2011] PhD @ UofA [Oct'09 - Dec'2014])
[Message Passing Inference in grpahical models;
interpreting NMR spectra -- to help analyze blood or urine samples for
diagnosis or prognosis
]
- Mohsen Hajiloo
(Medicine/Science Funding; w/S Damaraju; Ph.D. @ UofA [Sept 2009 - Dec 2013])
[Using prior bioloigical knowledge to understand SNP data]
-- then PDF at Goldenberg Lab [UofToronto], now Amazon [Seattle]
- Saman Vaisipour
(Ph.D. @ UofA [January 2008 - Dec 2013])
[Batch Effects -- BECCA] -- now at Google (Waterloo)
- Alireza Farhangfar
(NSERC, w/C Szepesvari, Alberta Ingenuity [F2006-S2013])
[active learning: deciding which images to label to produce an effective classifier]
- Ilya Levner
(NSERC, Killam, Alberta Ingenuity; w/H. Zhang),
Ph.D. @ UofA [2004-2008]
[Using deep nets to automatically learn effective segmenters]
[Now at FICO (San Diego)]
- ChiHoon Lee (NSERC,
GRA Rice), Ph.D. @ UofA [2003-2008 (now at Nokia [was Yahoo!])]
[Producing more effective extensions to CRFs (for labeling brain tumors)]
- Dan Lizotte
(NSERC, Killam, w/D. Schuurmans),
Ph.D. @ UofA [2003-2008]) (Now Ass't Prof at UofWaterloo (was PDF @ UofMichigan/McGill)
- Yuhong Guo
(Ph.D. Research Award; w/D. Schuurmans),
Ph.D. @ UofA [2002-2007]) (Then Australian National
University; now Temple University)
- Ramana Isukapalli
(Rutgers 2007; now at Bell Labs)
- Tingshao Zhu
(Ph.D. @ UofA; then EzSeer,
now Chinese Academy of Sciences,
Beijing, China
)
- Dale Schuurmans
(Ph.D. @ UofT; now Prof at UofAlberta)
- Moninder
Singh
(on Ph.D. committee, UPenn: now at IBM)
- Oliver Schulte
(on Ph.D. committee, CMU: now Professor at SFU [Philosophy/CS])
External for ...
- Yaling Zheng
(PhD @ Univ Nebraska, Lincoln
[Prof Steven Scott]; Dec 2011)
- Deng Kun (PhD @ Univ
Nebraska, Lincoln [Prof Steven Scott]; Aug 2009)
- Mahdi Shafiei (PhD @ Dalhousie [Prof Evangelos
Milios]; Aug 2009)
MSc students
- Roberto Vega
(M.Sc. @ UofA [January 2015-Dec 2016])
[fMRI analysis (w/M Brown); now PhD student]
- Luke Nitish
(M.Sc. @ UofA [Apr 2015- Dec 2016; now AMII staff])
[Topic Modeling for Survival Prediction]
- Bhaskar Sen
(M.Sc. @ UofA [Feb 2014- Jan 2016])
[fMRI analysis (w/M Brown); Now; PhD @ U Minneapolis]
- Zheng Shi
(M.Sc. @ UofA [Mar 2014-Dec 2015])
[Metabolic Endpoints (w/D Wishart)]
- Ping Jin
(M.Sc. @ UofA [Jan 2013-Dec 2014])
[Estimating Reservation Price -- now Alibaba (China), soon Microsoft]
- Sina Ghiassian
(M.Sc. @ UofA [Dec 2012- Sept 2014]); now PhD at UBC
[fMRI (w/M Brown)]
- Meysam Bastani
(M.Sc. @ UofA [May 2011- Nov 2013])
[Intelligent Diabetes Management (w/E Ryan)]
-- now ??
- Robert Tso
(M.Sc. @ UofA [Aug 2011-June 2013]
[Related to Bowel Disease (w/K Madson, R Fedorak (FoMD)]
-- now ??
-
Junfeng Wen
(M.Sc. @ UofA [Apr 2012-Aug 2013])
[Covariate Shift (w/C-N Yu)] [Now PhD student, UofA]
- Navid Zolghadr
(M.Sc. @ UofA [May 2011-Jan 2013]) [Now: Blackberry]
[Formal analysis of Probe Complexity (w/C Szepesvari)]
- Gagan Sidhu
(M.Sc. @ UofA [Feb 2011-July 2012])
[fMRI (w/Matt Brown])
- Babak Damavandi
(M.Sc. @ UofA [S2010-Nov 2011]; now Researcher at Google [Calif])
[Understanding the challenges of GWAS]
- Hsiu-Chin Lin
(M.Sc. @ UofA [S2009-F2010]; now PhD at UofEdinburgh)
[Survival prediction]
- Tom Eastman
(M.Sc. @ UofA [May 2008-Dec 2009]; now at 23&me [Calif])
[ Using metabolic pathways (eg, KEGG) to better understand metabolic profiles
(from urinalysis) ]
- Farzaneh Mirzazadeh
(MSc @ UofA [May 2008-Dec 2009]) (now: PhD at UofA, with RG + D Schuurmans)
[ Analysing Single Nucleotide Polymorphisms (SNPs) to address
treatment toxicity (with CCI) ]
- Fariba Mahdavifard
(M.Sc. @ UofA [Jan'08- Sept'09])
[ Learning to use microarray data and clinical observation to predict
properties of transplant (rejection, GFR, ...)] Now within ATAGC.
- Maysam Heydari
(M.Sc. @ UofA [S2006-Sept'09])
[Using textures within MRI scans to predict outcome for brain tumor patient
(Brain Tumor Analysis Project)]
- Babak Bostan
(M.Sc. @ UofA w/D. Szafron
[May'08-Sept'09])
[ Predicting which proteins on one organism participate in specific signaling
pathways based on homology with other organisms (within
Proteome Analyst) ]
- Jieshan (Shanny) Lu
(w/V Bulitko, M.Sc. @
UofA [S2008- Summer 2009])
[ Learning effective policy for multi-agent target pursuit ]
- Liyuang (Spike) Li
(M.Sc. @ UofA [S2007- Summer 2009])
[ Budgeted learning of belief net parameters -- decide which
(instance, attribute) probes are best, for learning a generative model.]
[Now at Amazon (was YaddaYadda / EMC)]
- Wei Wei
(M.Sc. @ UofA [Mar 2007-Dec 2008])
[ Analysing Single Nucleotide Polymorphisms (SNPs) to predict
breeding value for cattle (with AgFor) ]
[Now at CGI, Edmonton]
- Alejandro Isaza
(w/M Buro, M.Sc. @ UofA [S2007-...])
[Using Cover set heuristics to produce policy for multi-agent target
pursuit -- cops and robbers]
[Now at ??]
- Peter Wang (Graduate
Scholarship) [S2006-2007]
- Nasimeh Asgarian
M.Sc. @ UofA [F2004-2007] -- now AICML employee
- Aloak Kapoor (NSERC),
M.Sc. @ UofA F2004-2005 -- now IBM (Edmonton)
- Marianne Morris
(w/J Sander),
M.Sc. @ UofA F2002-S2005 -- now teaching at Grant McEwan
- Mark Schmidt
MSc @ UofA [F2003-S2005]; then PhD student @ UBC, then ... now Ass't Prof
at UBC
- Jack Newton (NSERC),
M.Sc. @ UofA [2001-04] -- then at ChenomX, now RocketFuel
- Brett Poulin
(
w/D. Szafron),
M.Sc. @ UofA [2002-04]) -- then Medical School (UofCalgary), now MD
- Roman Eisner
(w/D. Szafron),
M.Sc. @ UofA [2002-04]) -- then Human Metabolome Project (UofAlberta), then
... now at MTI
- Peng Wang
(w/D. Lin),
M.Sc. @ UofA (2004) -- SmartTechnology, Calgary
- Lihong Li
(w/V. Bulitko, M.Sc. @ UofA [2002];
then PhD at Rutgers, then Yahoo! (2009))
- Xiaomeng Wu (M.Sc. @
UofA [2001];
now PhD at UofA)
- Zhiyong Lu
(w/D. Szafron, M.Sc. @ UofA [2001-03]; now PhD at Colorado)
- Dan Lizotte (M.Sc. @
UofA [2001-03]; now PhD at UofA)
- Ajit Singh (M.Sc. @ UofA
[2001-03], now PhD at CMU)
- Haiyan Zhang (M.Sc. @ UofA, Pharmacy, with D. Wishart -- Jan 2002 [Now at Alberta Cancer Board])
- Wei Zhou (M.Sc. @ UofA -- Nov 2001 [Now Ph.D. student at UofWaterloo])
- Benjamin Korvemaker (M.Sc. @ UofA; now at AmikaNow!)
- Tim Van Allen (M.Sc. @ UofA -- Oct 2000; now at digiMine)
- Gao Yong [w/J Culberson] (M.Sc. @ UofA, Dec 2000)
- Karsten Verbeurgt (M.Sc. @ UofToronto)
- Joe Likuski (M.Sc. @ UofToronto)
- Cindy Chow (M.Sc. @ UofToronto)
Undergraduate students
- Abhinav Agrawalla [UARE: May 2016 - July 2016 (Intelligent Diabetes
Management, w/E Ryan)]
- Siddharth Muthukumar [UARE: May 2016 - July 2016 (fMRI on
FMBIRN data, w/M Gheiratmand)]
- Prachi Agrawal [MITACS Globalink: May 2015 - July 2015 (Intelligent Diabetes
Management, w/E Ryan)]
- Chi Zhang [UARE: July 2015 - Oct 2015 (Genetic Profiles,
etc, w/S Damaraju)]
- Xin Zhang [UARE + CSC: July 2015 - Oct 2015 (fMRI, w/M Brown)]
- Neil Borle
[NSERC USRA: May 2015 - August 2015 (NMR Spectroscopy - Bayesil,
w/D Wishart)]
- Rodrigo Mansueli Nunes
[Science without Borders: May 2014 - Aug 2014 (BTAP, w/ B Hoehn)]
- Abigail Patricia Mendoza Garcia
[MITACS Globalink: May 2014 - Aug 2014 (fMRI, w/M Brown)]
- Pranjal Daga [MITACS Globalink: May 2014
- Aug 2014 (Diabetes (IDM), w/E Ryan + N Asgarian)]
- Marc Parson [USRA: May 2013 - Aug 2013 (PSSP)]
- Jon Ferland (S2007)
- Kevin Waugh (F2006)
- Rhyan Arthur (Summer 2006 [BTGP]; now at YaddaYadda)
- James Wagner (Summer 2006 [HMP]; now at UBC/SFU)
- Mark Schmidt (BSc @
UofA [2003]; then MSc student @UofA...)
- Brian Stafford
(B.Sc. @ UofA; now EA)
- Samer Nassar
(B.Sc. @ UofA)
High School students (HIP, etc)
- Jaykumar Patel [HIP: May 2014 - Aug 2014 (Cancer Research, w/S Damaraju, N Asgarian)]
- Alex Sampley [w/Bret Hoehn] (BTAP; Summer 2012) [Now: UofA UGrad]
- Mona Wankhade [w/Nasimeh Asgarian] (VAMP, HapMap3 -- Summer 2012) [Now: UofA UGrad]
- Shayne Richard Baumgartner [w/Kit Chen, Meysam Bastani] (Diabetes --
Summer 2012) [Now: UofA UGrad]
Research Scientists, Employees
(Aug 2008)
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