SVD-k + BiCluster Bicluster Characteristics - Prognostic Datasets



Prognostic Datasets

P1
Breast Cancer
P2
AML
(Outcome)
P3
Central
Nervous System
P4
Prostate
(Outcome)
# of patients in 0 bicluster 29
0
4
0
# of patients in 1 bicluster 11
0
17
0
# of patients in >1 biclusters 36
15
39
21





Min / Max  # of patients in a bicluster 2  / 17
2 / 13
2 / 23
2 / 9
Average # of patients in a bicluster 8
5
8
4
Median # of patients in a bicluster 7.5
4
8
3





# of genes in 0 biclusters 16,370
6,525
6,426
11,714
# of genes in 1 bicluster  2,291
150
188
319
# of genes in >1 biclusters  4,964
454
515
567





Min / Max  # of genes in a bicluster   352 / 1,392
135
17 / 290
7 / 390
Average # of genes in a bicluster 1,041
265
162
207
Median # of genes in a bicluster 1,042
215
176.5
202





Average bicluster size 8,809
1,159
1,649
813
# of (gene,patient) pairs in 0 biclusters 1,654,959
99,983
408,708
255,790
# of (gene,patient) pairs in 1 bicluster 83,209 2,422
10,007
4,806
# of (gene,patient) pairs in >1 biclusters 57,332
4,530
9,025
4,004